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  5. AMTR_s00079p00169240

AMTR_s00079p00169240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.81

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00169240
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00194700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00082p00184630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.07 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G66140 ZFP4 zinc finger protein 4 0.03 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.09 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.03 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.02 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.03 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G05120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.1 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.05 Archaeplastida
AT5G27880 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.05 Archaeplastida
GSVIVT01011610001 No alias No description available 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
GSVIVT01027720001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Gb_26860 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os02g53530.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g57240.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g44190.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os11g48000.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_126188g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_54742g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_5999529g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c5_6880V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c7_19440V3.1 No alias zinc-finger protein 10 0.03 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc09g089590.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003962_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e013379_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e013845_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e016020_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.1 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!