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  5. AMTR_s00080p00165150

AMTR_s00080p00165150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00080.84

Description : Cell wall.hemicellulose.xylan.synthesis.xylosyltransferase activities.xylosyltransferase (IRX9)


Gene families : OG0001470 (Archaeplastida) Phylogenetic Tree(s): OG0001470_tree ,
OG_05_0001213 (LandPlants) Phylogenetic Tree(s): OG_05_0001213_tree ,
OG_06_0009111 (SeedPlants) Phylogenetic Tree(s): OG_06_0009111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00080p00165150
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT2G37090 IRX9 Nucleotide-diphospho-sugar transferases superfamily protein 0.12 Archaeplastida
GSVIVT01025636001 No alias Cell... 0.08 Archaeplastida
LOC_Os03g17850.1 No alias xylosyltransferase (IRX9) 0.04 Archaeplastida
LOC_Os05g03174.2 No alias xylosyltransferase (IRX9) 0.07 Archaeplastida
LOC_Os07g49370.1 No alias xylosyltransferase (IRX9) 0.02 Archaeplastida
MA_42440g0010 No alias xylosyltransferase (IRX9) 0.07 Archaeplastida
Smo78265 No alias Cell... 0.02 Archaeplastida
Solyc09g007420.4.1 No alias xylosyltransferase (IRX9) 0.04 Archaeplastida
Zm00001e001298_P002 No alias xylosyltransferase (IRX9) 0.03 Archaeplastida
Zm00001e020178_P001 No alias xylosyltransferase (IRX9) 0.07 Archaeplastida
Zm00001e026504_P001 No alias xylosyltransferase (IRX9) 0.02 Archaeplastida
Zm00001e027584_P001 No alias xylosyltransferase (IRX9) 0.07 Archaeplastida
Zm00001e040505_P002 No alias xylosyltransferase (IRX9) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005027 Glyco_trans_43 109 313
No external refs found!