1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00081p00168190

AMTR_s00081p00168190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00081.74

No description available


Gene families : OG0000726 (Archaeplastida) Phylogenetic Tree(s): OG0000726_tree ,
OG_05_0000641 (LandPlants) Phylogenetic Tree(s): OG_05_0000641_tree ,
OG_06_0000493 (SeedPlants) Phylogenetic Tree(s): OG_06_0000493_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00081p00168190
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00048530 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
LOC_Os01g07850.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g45590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g07940.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_15220g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_778510g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_814986g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9349606g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9550254g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026712_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e035745_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008242 omega peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025870 Glyoxalase-like_dom 19 134
No external refs found!