AMTR_s00082p00180450 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00082.42

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.xyloglucan endotransglucosylase/hydrolase

Gene families : OG0000045 (Archaeplastida) Phylogenetic Tree(s): OG0000045_tree ,
OG_05_0000314 (LandPlants) Phylogenetic Tree(s): OG_05_0000314_tree ,
OG_06_0001639 (SeedPlants) Phylogenetic Tree(s): OG_06_0001639_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00082p00180450
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AT1G11545	XTH8	xyloglucan endotransglucosylase/hydrolase 8	0.03	Archaeplastida
AT1G65310	XTH17, ATXTH17	xyloglucan endotransglucosylase/hydrolase 17	0.03	Archaeplastida
AT2G06850	EXGT-A1, XTH4, EXT	xyloglucan endotransglucosylase/hydrolase 4	0.06	Archaeplastida
AT4G03210	XTH9	xyloglucan endotransglucosylase/hydrolase 9	0.03	Archaeplastida
AT4G30290	XTH19, ATXTH19	xyloglucan endotransglucosylase/hydrolase 19	0.06	Archaeplastida
AT4G37800	XTH7	xyloglucan endotransglucosylase/hydrolase 7	0.04	Archaeplastida
AT5G13870	XTH5, EXGT-A4	xyloglucan endotransglucosylase/hydrolase 5	0.04	Archaeplastida
GSVIVT01001124001	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
GSVIVT01029157001	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max	0.03	Archaeplastida
GSVIVT01029175001	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
GSVIVT01029372001	No alias	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.07	Archaeplastida
Gb_07224	No alias	xyloglucan endotransglucosylase/hydrolase	0.04	Archaeplastida
Gb_10500	No alias	Xyloglucan endotransglucosylase/hydrolase protein 2...	0.02	Archaeplastida
Gb_22327	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
Gb_22346	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Archaeplastida
Gb_34730	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
LOC_Os02g57770.1	No alias	xyloglucan endotransglucosylase/hydrolase	0.03	Archaeplastida
LOC_Os03g13570.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
LOC_Os04g51460.1	No alias	Xyloglucan endotransglucosylase/hydrolase protein 24...	0.02	Archaeplastida
LOC_Os09g23220.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
LOC_Os10g02770.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
LOC_Os11g33270.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	Archaeplastida
MA_10428415g0010	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Archaeplastida
MA_10433908g0010	No alias	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.05	Archaeplastida
MA_10434153g0020	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_134633g0030	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_17973g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Archaeplastida
MA_19153g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_208401g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.02	Archaeplastida
MA_254951g0010	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
MA_265205g0010	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
MA_342978g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.02	Archaeplastida
MA_8367646g0010	No alias	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.02	Archaeplastida
Mp1g13990.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Mp2g21490.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	Archaeplastida
Mp3g10340.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
Pp3c16_20960V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.04	Archaeplastida
Pp3c25_10500V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.04	Archaeplastida
Pp3c25_10760V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Archaeplastida
Pp3c6_600V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Archaeplastida
Solyc01g099630.4.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase 1...	0.04	Archaeplastida
Solyc01g106650.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Solyc02g080160.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc03g031800.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Solyc03g093130.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Solyc06g083400.3.1	No alias	Xyloglucan endotransglucosylase/hydrolase protein 2...	0.03	Archaeplastida
Solyc07g055990.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	Archaeplastida
Solyc10g005350.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Solyc12g007250.1.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Solyc12g007260.2.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Solyc12g007270.3.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Archaeplastida
Solyc12g017240.2.1	No alias	Xyloglucan endotransglucosylase/hydrolase protein 15...	0.02	Archaeplastida
Zm00001e013135_P002	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.06	Archaeplastida
Zm00001e024202_P001	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.07	Archaeplastida
Zm00001e034059_P001	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida
Zm00001e036063_P001	No alias	Putative xyloglucan endotransglucosylase/hydrolase...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0047134	protein-disulfide reductase activity	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR010713	XET_C	254	290
IPR000757	GH16	38	220

External Links

No external refs found!

AMTR_s00082p00180450 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation