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  5. AMTR_s00083p00066470

AMTR_s00083p00066470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00083.20

No description available


Gene families : OG0001525 (Archaeplastida) Phylogenetic Tree(s): OG0001525_tree ,
OG_05_0000988 (LandPlants) Phylogenetic Tree(s): OG_05_0000988_tree ,
OG_06_0000498 (SeedPlants) Phylogenetic Tree(s): OG_06_0000498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00083p00066470
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00117020 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00134p00075640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!