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  5. AMTR_s00084p00111010

AMTR_s00084p00111010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.29

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0002202 (SeedPlants) Phylogenetic Tree(s): OG_06_0002202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00084p00111010
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.08 Archaeplastida
MA_448849g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Mp4g04920.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Zm00001e021526_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Zm00001e030156_P003 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!