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  5. AMTR_s00084p00117480

AMTR_s00084p00117480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.35

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.plastidial ribosome-associated proteins.hibernation-promoting factor (PSRP1)


Gene families : OG0005738 (Archaeplastida) Phylogenetic Tree(s): OG0005738_tree ,
OG_05_0007364 (LandPlants) Phylogenetic Tree(s): OG_05_0007364_tree ,
OG_06_0006761 (SeedPlants) Phylogenetic Tree(s): OG_06_0006761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00084p00117480
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Mp5g07020.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.02 Archaeplastida
Solyc06g073090.3.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003489 RHF/RaiA 49 150
No external refs found!