AMTR_s00084p00139550 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.38

Description : NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana

Gene families : OG0001064 (Archaeplastida) Phylogenetic Tree(s): OG0001064_tree ,
OG_05_0002952 (LandPlants) Phylogenetic Tree(s): OG_05_0002952_tree ,
OG_06_0005031 (SeedPlants) Phylogenetic Tree(s): OG_06_0005031_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00084p00139550
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s03399p00004430	evm_27.TU.AmTr_v1...	NADH-ubiquinone oxidoreductase 49 kDa subunit...	0.03	Archaeplastida
ATCG01110	NDHH	NAD(P)H dehydrogenase subunit H	0.04	Archaeplastida
ATMG00510	NAD7	NADH dehydrogenase subunit 7	0.06	Archaeplastida
GSVIVT01004958001	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.04	Archaeplastida
GSVIVT01004966001	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.04	Archaeplastida
GSVIVT01004967001	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.04	Archaeplastida
GSVIVT01006220001	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.04	Archaeplastida
GSVIVT01006222001	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.04	Archaeplastida
Gb_26226	No alias	component NdhH of NDH subcomplex A	0.03	Archaeplastida
LOC_Os04g16732.1	No alias	component NdhH of NDH subcomplex A	0.05	Archaeplastida
LOC_Os07g41300.1	No alias	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic...	0.04	Archaeplastida
LOC_Os10g21394.1	No alias	component NdhH of NDH subcomplex A	0.04	Archaeplastida
LOC_Os12g33958.1	No alias	component NQO4 of NADH dehydrogenase electron output (module Q)	0.03	Archaeplastida
Mp2g04290.1	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.1	Archaeplastida
Mp2g04300.1	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.1	Archaeplastida
Mp5g10290.1	No alias	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic...	0.02	Archaeplastida
Smo137890	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.03	Archaeplastida
Solyc00g500087.1.1	No alias	component NdhH of NDH subcomplex A	0.04	Archaeplastida
Solyc00g500124.1.1	No alias	component NdhH of NDH subcomplex A	0.04	Archaeplastida
Solyc00g500183.1.1	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.03	Archaeplastida
Solyc00g500184.1.1	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.03	Archaeplastida
Solyc00g500185.1.1	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.07	Archaeplastida
Solyc00g500192.1.1	No alias	component NdhH of NDH subcomplex A	0.04	Archaeplastida
Solyc09g009360.1.1	No alias	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2...	0.04	Archaeplastida
Solyc12g035590.2.1	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0048038	quinone binding	IEA	Interproscan
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0051287	NAD binding	IEA	Interproscan
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006754	ATP biosynthetic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009259	ribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044455	mitochondrial membrane part	IEP	Neighborhood
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
BP	GO:0046034	ATP metabolic process	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
CC	GO:0098798	mitochondrial protein complex	IEP	Neighborhood
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1902600	proton transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001135	NADH_Q_OxRdtase_suD	1	155

External Links

No external refs found!

AMTR_s00084p00139550 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation