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  5. AMTR_s00085p00055420

AMTR_s00085p00055420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.25

Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.SPC25 component


Gene families : OG0003556 (Archaeplastida) Phylogenetic Tree(s): OG0003556_tree ,
OG_05_0003343 (LandPlants) Phylogenetic Tree(s): OG_05_0003343_tree ,
OG_06_0003166 (SeedPlants) Phylogenetic Tree(s): OG_06_0003166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00055420
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT3G48210 No alias CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,... 0.03 Archaeplastida
Cpa|evm.model.tig00020684.34 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
LOC_Os01g74170.1 No alias component SPC25 of NDC80 outer kinetochore complex 0.02 Archaeplastida
MA_10431861g0010 No alias No annotation 0.02 Archaeplastida
Pp3c3_37370V3.1 No alias No annotation 0.02 Archaeplastida
Zm00001e028256_P002 No alias component SPC25 of NDC80 outer kinetochore complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013255 Spc25 152 223
No external refs found!