AMTR_s00085p00124710 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.79

Description : Probable disease resistance protein RPP1 OS=Arabidopsis thaliana

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0019750 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00085p00124710
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00138180	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.04	Archaeplastida
AT4G14370	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Archaeplastida
GSVIVT01025968001	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.06	Archaeplastida
Gb_09783	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	Archaeplastida
Gb_27126	No alias	effector receptor (NLR)	0.02	Archaeplastida
MA_10428569g0010	No alias	effector receptor (NLR)	0.02	Archaeplastida
Pp3c10_15970V3.1	No alias	transmembrane receptors;ATP binding	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	3	210

External Links

No external refs found!