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  5. AMTR_s00085p00172090

AMTR_s00085p00172090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.108

Description : Protein trichome birefringence-like 2 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00172090
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G11030 TBL32 TRICHOME BIREFRINGENCE-LIKE 32 0.05 Archaeplastida
AT5G06230 TBL9 TRICHOME BIREFRINGENCE-LIKE 9 0.02 Archaeplastida
GSVIVT01026515001 No alias Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g082940.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 204 490
IPR025846 PMR5_N_dom 150 202
No external refs found!