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  5. AMTR_s00086p00066190

AMTR_s00086p00066190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.29

Description : External stimuli response.gravity.sensing and signalling.SHR transcription factor


Gene families : OG0006923 (Archaeplastida) Phylogenetic Tree(s): OG0006923_tree ,
OG_05_0004840 (LandPlants) Phylogenetic Tree(s): OG_05_0004840_tree ,
OG_06_0004404 (SeedPlants) Phylogenetic Tree(s): OG_06_0004404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00066190
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT4G37650 SHR, SGR7 GRAS family transcription factor 0.05 Archaeplastida
GSVIVT01000107001 No alias External stimuli response.gravity.sensing and... 0.04 Archaeplastida
Solyc02g092370.1.1 No alias transcription factor (GRAS). SHR gravity signalling... 0.03 Archaeplastida
Zm00001e002085_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.05 Archaeplastida
Zm00001e035411_P001 No alias transcription factor (GRAS). SHR gravity signalling... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 31 404
No external refs found!