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  5. AMTR_s00086p00155150

AMTR_s00086p00155150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.92

Description : Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica


Gene families : OG0002463 (Archaeplastida) Phylogenetic Tree(s): OG0002463_tree ,
OG_05_0002040 (LandPlants) Phylogenetic Tree(s): OG_05_0002040_tree ,
OG_06_0001831 (SeedPlants) Phylogenetic Tree(s): OG_06_0001831_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00155150
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00230860 evm_27.TU.AmTr_v1... Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 10 72
No external refs found!