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  5. AMTR_s00087p00135370

AMTR_s00087p00135370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00087.43

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component


Gene families : OG0005862 (Archaeplastida) Phylogenetic Tree(s): OG0005862_tree ,
OG_05_0006900 (LandPlants) Phylogenetic Tree(s): OG_05_0006900_tree ,
OG_06_0008288 (SeedPlants) Phylogenetic Tree(s): OG_06_0008288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00087p00135370
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Cre16.g676314 No alias Protein biosynthesis.translation... 0.04 Archaeplastida
GSVIVT01031659001 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
LOC_Os04g30780.1 No alias component eIF3h of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Mp3g20490.1 No alias component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Pp3c6_17230V3.1 No alias translation initiation factor 3 subunit H1 0.03 Archaeplastida
Zm00001e040713_P002 No alias component eIF3h of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0004828 serine-tRNA ligase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005850 eukaryotic translation initiation factor 2 complex IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006434 seryl-tRNA aminoacylation IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 22 127
No external refs found!