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  5. AMTR_s00088p00040490

AMTR_s00088p00040490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.19

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001120 (LandPlants) Phylogenetic Tree(s): OG_05_0001120_tree ,
OG_06_0005078 (SeedPlants) Phylogenetic Tree(s): OG_06_0005078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00040490
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT1G63840 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Archaeplastida
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G20885 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g61470.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g07140.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo137213 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc05g055140.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc07g006360.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015796_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 142 186
No external refs found!