AT1G56210

Description : Heavy metal transport/detoxification superfamily protein

Gene families : OG0000049 (Archaeplastida) Phylogenetic Tree(s): OG0000049_tree ,
OG_05_0000107 (LandPlants) Phylogenetic Tree(s): OG_05_0000107_tree ,
OG_06_0041438 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G56210
Cluster	HCCA: Cluster_127

Target	Alias	Description	ECC score	Gene Family Method
AT2G28660	No alias	Chloroplast-targeted copper chaperone protein	0.03	Archaeplastida
AT5G37860	No alias	Heavy metal transport/detoxification superfamily protein	0.05	Archaeplastida
Mp2g25230.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c25_3920V3.1	No alias	homolog of anti-oxidant 1	0.03	Archaeplastida
Pp3c3_29170V3.1	No alias	homolog of anti-oxidant 1	0.03	Archaeplastida
Smo442871	No alias	No description available	0.04	Archaeplastida
Zm00001e003565_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e011765_P002	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e017051_P001	No alias	Heavy metal-associated isoprenylated plant protein 37...	0.04	Archaeplastida
Zm00001e019945_P001	No alias	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	ISS	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000026	alpha-1,2-mannosyltransferase activity	IEP	Neighborhood
MF	GO:0000030	mannosyltransferase activity	IEP	Neighborhood
BP	GO:0000741	karyogamy	IEP	Neighborhood
CC	GO:0000775	chromosome, centromeric region	IEP	Neighborhood
CC	GO:0000785	chromatin	IEP	Neighborhood
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Neighborhood
MF	GO:0004377	GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	IEP	Neighborhood
CC	GO:0005635	nuclear envelope	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006310	DNA recombination	IEP	Neighborhood
BP	GO:0006312	mitotic recombination	IEP	Neighborhood
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
CC	GO:0009295	nucleoid	IEP	Neighborhood
BP	GO:0009566	fertilization	IEP	Neighborhood
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0010440	stomatal lineage progression	IEP	Neighborhood
BP	GO:0010500	transmitting tissue development	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IEP	Neighborhood
BP	GO:0032506	cytokinetic process	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0036503	ERAD pathway	IEP	Neighborhood
BP	GO:0040034	regulation of development, heterochronic	IEP	Neighborhood
CC	GO:0042644	chloroplast nucleoid	IEP	Neighborhood
CC	GO:0042646	plastid nucleoid	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
BP	GO:0048284	organelle fusion	IEP	Neighborhood
BP	GO:0048438	floral whorl development	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048462	carpel formation	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Neighborhood
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051304	chromosome separation	IEP	Neighborhood
BP	GO:0051307	meiotic chromosome separation	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
CC	GO:0098687	chromosomal region	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1902410	mitotic cytokinetic process	IEP	Neighborhood
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	Neighborhood
BP	GO:1903046	meiotic cell cycle process	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	44	97

External Links

No external refs found!

AT1G56210

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation