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  5. AMTR_s00088p00046850

AMTR_s00088p00046850


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana


Gene families : OG0013991 (Archaeplastida) Phylogenetic Tree(s): OG0013991_tree ,
OG_05_0044434 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0038983 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00046850
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Smo136503 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 189 234
IPR002885 Pentatricopeptide_repeat 288 334
IPR002885 Pentatricopeptide_repeat 119 165
IPR002885 Pentatricopeptide_repeat 27 50
No external refs found!