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  5. AMTR_s00088p00054060

AMTR_s00088p00054060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.31

No description available


Gene families : OG0002947 (Archaeplastida) Phylogenetic Tree(s): OG0002947_tree ,
OG_05_0001982 (LandPlants) Phylogenetic Tree(s): OG_05_0001982_tree ,
OG_06_0001105 (SeedPlants) Phylogenetic Tree(s): OG_06_0001105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00054060
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248680 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00088p00061690 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00088p00061760 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00088p00063810 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G13500 No alias Protein of unknown function (DUF1262) 0.06 Archaeplastida
AT1G13510 No alias Protein of unknown function (DUF1262) 0.07 Archaeplastida
AT1G13520 No alias Protein of unknown function (DUF1262) 0.07 Archaeplastida
AT1G61600 No alias Protein of unknown function (DUF1262) 0.03 Archaeplastida
GSVIVT01012026001 No alias No description available 0.04 Archaeplastida
Gb_01792 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_22146 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g31890.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435025g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8352311g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc02g089650.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g010460.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010683 DUF1262 29 136
No external refs found!