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  5. AMTR_s00088p00057720

AMTR_s00088p00057720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.33

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00057720
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00006p00263900 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00006p00263910 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00006p00265550 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00088p00152700 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Archaeplastida
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G59620 CW9 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.05 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
ChrUn.fgenesh.mRNA.29 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
GSVIVT01007238001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024114001 No alias External stimuli response.biotic stress.pathogen... 0.01 Archaeplastida
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01026747001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01026750001 No alias Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_10845 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25801 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
Gb_25804 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25817 No alias Putative disease resistance protein At1g58400... 0.02 Archaeplastida
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.02 Archaeplastida
Gb_26475 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_27427 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_29699 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_35026 No alias Disease resistance protein RPP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g48520.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g10260.1 No alias no description available(sp|q2r8l1|rga5s_orysj : 447.0) 0.02 Archaeplastida
LOC_Os08g16070.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g09750.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g34150.1 No alias no description available(sp|f7j0m6|rga4s_orysj : 234.0) 0.02 Archaeplastida
LOC_Os09g34160.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g04674.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g12300.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os11g12340.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10297274g0010 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.03 Archaeplastida
MA_10429865g0020 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.02 Archaeplastida
MA_253772g0010 No alias Probable disease resistance protein At5g63020... 0.01 Archaeplastida
MA_53379g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.01 Archaeplastida
MA_6828207g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc02g084890.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.05 Archaeplastida
Solyc04g009240.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc07g039410.3.1 No alias Putative disease resistance RPP13-like protein 3... 0.03 Archaeplastida
Zm00001e024479_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 161 442
No external refs found!