AMTR_s00088p00059310 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.34

No description available

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00088p00059310
Cluster	HCCA: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00090p00087950	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
GSVIVT01032826001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.02	Archaeplastida
LOC_Os08g16070.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_180285g0010	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	51	107

External Links

No external refs found!