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  5. AMTR_s00088p00076560

AMTR_s00088p00076560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.44

No description available


Gene families : OG0000647 (Archaeplastida) Phylogenetic Tree(s): OG0000647_tree ,
OG_05_0000409 (LandPlants) Phylogenetic Tree(s): OG_05_0000409_tree ,
OG_06_0011511 (SeedPlants) Phylogenetic Tree(s): OG_06_0011511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00076560
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00113920 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein At2g01680... 0.05 Archaeplastida
AT5G54710 No alias Ankyrin repeat family protein 0.04 Archaeplastida
AT5G54720 No alias Ankyrin repeat family protein 0.04 Archaeplastida
GSVIVT01025591001 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
GSVIVT01035671001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_13078 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g61990.2 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 Archaeplastida
MA_10427678g0010 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g019060.2.1 No alias Ankyrin repeat-containing protein At5g02620... 0.02 Archaeplastida
Zm00001e001261_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010178_P002 No alias Ankyrin repeat-containing protein At5g02620... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 171 280
No external refs found!