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Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.57
Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.VPS28 component
Gene families : OG0004378 (Archaeplastida) Phylogenetic Tree(s): OG0004378_tree ,
OG_05_0004887 (LandPlants) Phylogenetic Tree(s): OG_05_0004887_tree ,
OG_06_0005884 (SeedPlants) Phylogenetic Tree(s): OG_06_0005884_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00088p00095460 | |
| Cluster | HCCA: Cluster_189 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_37209 | No alias | component VPS28 of ESCRT-I complex | 0.03 | Archaeplastida | |
| Solyc03g031750.2.1 | No alias | component VPS28 of ESCRT-I complex | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0005496 | steroid binding | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006333 | chromatin assembly or disassembly | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0032934 | sterol binding | IEP | Neighborhood |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
| BP | GO:0051259 | protein complex oligomerization | IEP | Neighborhood |
| BP | GO:0051260 | protein homooligomerization | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007143 | Vps28 | 18 | 203 |
| No external refs found! |