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  5. AMTR_s00088p00130080

AMTR_s00088p00130080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.95

Description : Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001770 (Archaeplastida) Phylogenetic Tree(s): OG0001770_tree ,
OG_05_0001246 (LandPlants) Phylogenetic Tree(s): OG_05_0001246_tree ,
OG_06_0001272 (SeedPlants) Phylogenetic Tree(s): OG_06_0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00130080
Cluster HCCA: Cluster_263


Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 371 397
IPR001876 Znf_RanBP2 336 360
IPR001876 Znf_RanBP2 293 317
No external refs found!