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  5. AMTR_s00088p00141710

AMTR_s00088p00141710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.109

Description : External stimuli response.gravity.sensing and signalling.ARG1 signalling protein factor


Gene families : OG0001496 (Archaeplastida) Phylogenetic Tree(s): OG0001496_tree ,
OG_05_0001678 (LandPlants) Phylogenetic Tree(s): OG_05_0001678_tree ,
OG_06_0001685 (SeedPlants) Phylogenetic Tree(s): OG_06_0001685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00141710
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_16600V3.1 No alias Chaperone DnaJ-domain superfamily protein 0.02 Archaeplastida
Zm00001e018227_P001 No alias ARG1 gravity signalling protein factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 20 82
No external refs found!