AMTR_s00088p00145510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.111

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00145510
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00039p00193810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.06 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.02 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.03 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.06 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.03 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.05 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G05120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G06650 GIS2 C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G14010 KNU C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.06 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.04 Archaeplastida
GSVIVT01009401001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 Archaeplastida
GSVIVT01011610001 No alias No description available 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_15338 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_16852 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_26860 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_27734 No alias Zinc finger protein 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os02g53530.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g11680.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g13600.2 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os06g10470.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g44190.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g26200.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g26210.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g27320.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os11g48000.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_121523g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_126188g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_54742g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c3_5040V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Smo110103 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g089590.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g078970.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e013379_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e017991_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!