AMTR_s00088p00164440 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.137

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000250 (LandPlants) Phylogenetic Tree(s): OG_05_0000250_tree ,
OG_06_0002801 (SeedPlants) Phylogenetic Tree(s): OG_06_0002801_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00088p00164440
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.03	Archaeplastida
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.02	Archaeplastida
AT3G56400	ATWRKY70, WRKY70	WRKY DNA-binding protein 70	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.04	Archaeplastida
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.03	Archaeplastida
GSVIVT01001332001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01008046001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01014854001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01020060001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01020864001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01021397001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01021765001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01022067001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01022259001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01025562001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01029688001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01035426001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01035884001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01036223001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_01873	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_31953	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g51690.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os02g47060.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os04g21950.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os04g51560.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os05g03900.2	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g04640.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g27730.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
LOC_Os05g40080.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os06g06360.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os07g02060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os11g02480.2	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10426648g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10428770g0010	No alias	transcription factor (WRKY). channel component MCU of...	0.02	Archaeplastida
MA_107950g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_120969g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_126273g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_136551g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_558583g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_88437g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp2g20960.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp8g10640.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Pp3c11_1790V3.1	No alias	WRKY DNA-binding protein 48	0.02	Archaeplastida
Pp3c13_10830V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.03	Archaeplastida
Pp3c23_10680V3.1	No alias	WRKY DNA-binding protein 57	0.01	Archaeplastida
Pp3c7_24490V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.05	Archaeplastida
Smo73221	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc01g089960.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc01g095630.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc02g032950.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc02g080890.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g088340.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc03g007380.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc04g051540.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc04g051690.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc04g072070.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc06g048870.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc06g066370.4.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Solyc07g055280.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc07g066220.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc08g081610.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g011200.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e001512_P003	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e002033_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e003146_P002	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e007023_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e010048_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e019827_P003	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027989_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e029049_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e029445_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e034150_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e035859_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e038062_P002	No alias	transcription factor (WRKY)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	259	316
IPR003657	WRKY_dom	436	494

External Links

No external refs found!

AMTR_s00088p00164440 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation