1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00088p00177890

AMTR_s00088p00177890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.157

Description : BTB/POZ domain-containing protein At5g48130 OS=Arabidopsis thaliana


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0004141 (LandPlants) Phylogenetic Tree(s): OG_05_0004141_tree ,
OG_06_0006443 (SeedPlants) Phylogenetic Tree(s): OG_06_0006443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00177890
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT5G47800 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
GSVIVT01000400001 No alias BTB/POZ domain-containing protein At3g22104... 0.02 Archaeplastida
GSVIVT01010205001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027413001 No alias BTB/POZ domain-containing protein At5g17580... 0.04 Archaeplastida
Gb_32071 No alias BTB/POZ domain-containing protein At5g48130... 0.03 Archaeplastida
MA_135496g0010 No alias Root phototropism protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_38486g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
MA_448959g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.02 Archaeplastida
Solyc01g105680.4.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.07 Archaeplastida
Solyc02g079860.1.1 No alias BTB/POZ domain-containing protein At3g22104... 0.03 Archaeplastida
Solyc07g052970.3.1 No alias BTB/POZ domain-containing protein At3g22104... 0.07 Archaeplastida
Zm00001e033674_P003 No alias BTB/POZ domain-containing protein At5g47800... 0.03 Archaeplastida
Zm00001e035189_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 216 463
No external refs found!