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Aliases : evm_27.TU.AmTr_v1.0_scaffold00089.9
Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component
Gene families : OG0002448 (Archaeplastida) Phylogenetic Tree(s): OG0002448_tree ,
OG_05_0003543 (LandPlants) Phylogenetic Tree(s): OG_05_0003543_tree ,
OG_06_0004391 (SeedPlants) Phylogenetic Tree(s): OG_06_0004391_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00089p00034850 | |
| Cluster | HCCA: Cluster_233 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G32730 | No alias | 26S proteasome regulatory complex, non-ATPase... | 0.08 | Archaeplastida | |
| Cpa|evm.model.tig00000903.41 | No alias | Protein degradation.26S proteasome.regulatory... | 0.02 | Archaeplastida | |
| Cre17.g727950 | No alias | Protein degradation.26S proteasome.regulatory... | 0.03 | Archaeplastida | |
| GSVIVT01003914001 | No alias | Protein degradation.26S proteasome.regulatory... | 0.05 | Archaeplastida | |
| GSVIVT01003915001 | No alias | 26S proteasome non-ATPase regulatory subunit 1 homolog A... | 0.04 | Archaeplastida | |
| GSVIVT01026206001 | No alias | Protein degradation.26S proteasome.regulatory... | 0.03 | Archaeplastida | |
| Gb_01242 | No alias | regulatory component RPN2 of 26S proteasome | 0.04 | Archaeplastida | |
| Gb_11079 | No alias | regulatory component RPN2 of 26S proteasome | 0.04 | Archaeplastida | |
| LOC_Os04g51910.1 | No alias | regulatory component RPN2 of 26S proteasome | 0.04 | Archaeplastida | |
| LOC_Os08g12820.1 | No alias | regulatory component RPN2 of 26S proteasome | 0.03 | Archaeplastida | |
| MA_10427364g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10430856g0020 | No alias | regulatory component RPN2 of 26S proteasome | 0.03 | Archaeplastida | |
| MA_30487g0010 | No alias | regulatory component RPN2 of 26S proteasome | 0.04 | Archaeplastida | |
| Mp6g04700.1 | No alias | regulatory component RPN2 of 26S proteasome | 0.03 | Archaeplastida | |
| Pp3c20_16700V3.1 | No alias | 26S proteasome regulatory complex, non-ATPase... | 0.07 | Archaeplastida | |
| Pp3c24_17290V3.1 | No alias | 26S proteasome regulatory complex, non-ATPase... | 0.08 | Archaeplastida | |
| Pp3c8_15860V3.1 | No alias | 26S proteasome regulatory complex, non-ATPase... | 0.05 | Archaeplastida | |
| Smo167705 | No alias | Protein degradation.26S proteasome.regulatory... | 0.04 | Archaeplastida | |
| Solyc05g053650.3.1 | No alias | regulatory component RPN2 of 26S proteasome | 0.04 | Archaeplastida | |
| Solyc09g091750.3.1 | No alias | regulatory component RPN2 of 26S proteasome | 0.07 | Archaeplastida | |
| Zm00001e021573_P002 | No alias | regulatory component RPN2 of 26S proteasome | 0.05 | Archaeplastida | |
| Zm00001e040048_P001 | No alias | regulatory component RPN2 of 26S proteasome | 0.03 | Archaeplastida | |
| Zm00001e041606_P001 | No alias | regulatory component RPN2 of 26S proteasome | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| CC | GO:0000502 | proteasome complex | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| CC | GO:0005798 | Golgi-associated vesicle | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| CC | GO:0005853 | eukaryotic translation elongation factor 1 complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006887 | exocytosis | IEP | Neighborhood |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009894 | regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015672 | monovalent inorganic cation transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0015988 | energy coupled proton transmembrane transport, against electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015991 | ATP hydrolysis coupled proton transport | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0017144 | drug metabolic process | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030126 | COPI vesicle coat | IEP | Neighborhood |
| CC | GO:0030127 | COPII vesicle coat | IEP | Neighborhood |
| CC | GO:0030131 | clathrin adaptor complex | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030955 | potassium ion binding | IEP | Neighborhood |
| MF | GO:0031369 | translation initiation factor binding | IEP | Neighborhood |
| CC | GO:0031410 | cytoplasmic vesicle | IEP | Neighborhood |
| MF | GO:0031420 | alkali metal ion binding | IEP | Neighborhood |
| CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| CC | GO:0031982 | vesicle | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Neighborhood |
| BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046034 | ATP metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046903 | secretion | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| BP | GO:0090662 | ATP hydrolysis coupled transmembrane transport | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| CC | GO:0097708 | intracellular vesicle | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| BP | GO:0098655 | cation transmembrane transport | IEP | Neighborhood |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| BP | GO:0099131 | ATP hydrolysis coupled ion transmembrane transport | IEP | Neighborhood |
| BP | GO:0099132 | ATP hydrolysis coupled cation transmembrane transport | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1902600 | proton transmembrane transport | IEP | Neighborhood |
| CC | GO:1905368 | peptidase complex | IEP | Neighborhood |
| CC | GO:1905369 | endopeptidase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |