1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00089p00088120

AMTR_s00089p00088120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00089.44

No description available


Gene families : OG0007819 (Archaeplastida) Phylogenetic Tree(s): OG0007819_tree ,
OG_05_0006108 (LandPlants) Phylogenetic Tree(s): OG_05_0006108_tree ,
OG_06_0003925 (SeedPlants) Phylogenetic Tree(s): OG_06_0003925_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00089p00088120
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00243060 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00005p00243440 evm_27.TU.AmTr_v1... No description available 0.11 Archaeplastida
AMTR_s00005p00250290 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00005p00264830 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!