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  5. AMTR_s00090p00035360

AMTR_s00090p00035360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00090.6

Description : Phenylalanine--tRNA ligase alpha subunit, cytoplasmic OS=Arabidopsis thaliana


Gene families : OG0004947 (Archaeplastida) Phylogenetic Tree(s): OG0004947_tree ,
OG_05_0005397 (LandPlants) Phylogenetic Tree(s): OG_05_0005397_tree ,
OG_06_0005783 (SeedPlants) Phylogenetic Tree(s): OG_06_0005783_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00090p00035360
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00035850 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0008252 nucleotidase activity IEP Neighborhood
MF GO:0008253 5'-nucleotidase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002319 Phenylalanyl-tRNA_Synthase 74 120
No external refs found!