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  5. AMTR_s00090p00088070

AMTR_s00090p00088070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00090.32

No description available


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00090p00088070
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00088p00152540 evm_27.TU.AmTr_v1... Putative disease resistance RPP13-like protein 3... 0.03 Archaeplastida
AMTR_s00090p00087950 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.05 Archaeplastida
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.06 Archaeplastida
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G59620 CW9 Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.02 Archaeplastida
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.04 Archaeplastida
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.05 Archaeplastida
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01007238001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01024099001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
GSVIVT01024100001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01024101001 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01026747001 No alias Putative disease resistance protein At1g50180... 0.02 Archaeplastida
GSVIVT01026750001 No alias Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032422001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_10845 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25801 No alias Probable disease resistance protein At5g63020... 0.02 Archaeplastida
Gb_25803 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25804 No alias Probable disease resistance protein At1g61180... 0.02 Archaeplastida
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.05 Archaeplastida
Gb_27427 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_29699 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_32662 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_37038 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_40379 No alias Putative disease resistance protein At1g58400... 0.02 Archaeplastida
Gb_40740 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
LOC_Os08g10260.1 No alias no description available(sp|q2r8l1|rga5s_orysj : 447.0) 0.03 Archaeplastida
LOC_Os08g16070.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g09490.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g09750.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g04674.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g11960.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g11990.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g12000.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g12300.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os11g12340.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10429865g0020 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.02 Archaeplastida
MA_41013g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.01 Archaeplastida
Solyc02g084890.3.1 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.07 Archaeplastida
Solyc04g009090.2.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc04g009240.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g009250.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g009660.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g009690.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e002409_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e024481_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!