1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G56520

AT1G56520


Description : Disease resistance protein (TIR-NBS-LRR class) family


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000769 (LandPlants) Phylogenetic Tree(s): OG_05_0000769_tree ,
OG_06_0000349 (SeedPlants) Phylogenetic Tree(s): OG_06_0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56520
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT1G17615 No alias Disease resistance protein (TIR-NBS class) 0.06 Archaeplastida
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
AT1G57650 No alias ATP binding 0.05 Archaeplastida
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT3G25505 No alias No description available 0.05 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT4G16857 No alias No description available 0.1 Archaeplastida
AT4G16900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.1 Archaeplastida
AT4G16960 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 Archaeplastida
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G18370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.06 Archaeplastida
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
GSVIVT01001510001 No alias No description available 0.04 Archaeplastida
GSVIVT01003262001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.06 Archaeplastida
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.05 Archaeplastida
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01022982001 No alias No description available 0.09 Archaeplastida
GSVIVT01022984001 No alias External stimuli response.biotic stress.pathogen... 0.07 Archaeplastida
GSVIVT01023025001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 Archaeplastida
GSVIVT01025907001 No alias External stimuli response.biotic stress.pathogen... 0.08 Archaeplastida
GSVIVT01034461001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 Archaeplastida
GSVIVT01036400001 No alias External stimuli response.biotic stress.pathogen... 0.08 Archaeplastida
Gb_04201 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_11355 No alias Probable disease resistance protein RPP1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_11356 No alias effector receptor (NLR) 0.04 Archaeplastida
Gb_12318 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_16268 No alias Probable disease resistance protein RPP1 OS=Arabidopsis... 0.05 Archaeplastida
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_25097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_26215 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 Archaeplastida
Gb_36252 No alias effector receptor (NLR) 0.04 Archaeplastida
MA_10433003g0040 No alias effector receptor (NLR) 0.03 Archaeplastida
Solyc01g102840.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc02g032650.3.1 No alias effector receptor (NLR) 0.06 Archaeplastida
Solyc04g007320.3.1 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc05g007850.2.1 No alias effector receptor (NLR) 0.05 Archaeplastida
Solyc07g052780.3.1 No alias effector receptor (NLR) 0.05 Archaeplastida
Solyc09g092410.4.1 No alias effector receptor (NLR) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0002239 response to oomycetes IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0004383 guanylate cyclase activity IEP Neighborhood
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006182 cGMP biosynthetic process IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
BP GO:0009187 cyclic nucleotide metabolic process IEP Neighborhood
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009610 response to symbiotic fungus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009626 plant-type hypersensitive response IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
BP GO:0009816 defense response to bacterium, incompatible interaction IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
MF GO:0015205 nucleobase transmembrane transporter activity IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016849 phosphorus-oxygen lyase activity IEP Neighborhood
MF GO:0019904 protein domain specific binding IEP Neighborhood
MF GO:0030275 LRR domain binding IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0034050 host programmed cell death induced by symbiont IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0046068 cGMP metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000157 TIR_dom 13 178
IPR011713 Leu-rich_rpt_3 603 622
IPR002182 NB-ARC 196 426
No external refs found!