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  5. AT1G56580

AT1G56580 (SVB)


Aliases : SVB

Description : Protein of unknown function, DUF538


Gene families : OG0000382 (Archaeplastida) Phylogenetic Tree(s): OG0000382_tree ,
OG_05_0000235 (LandPlants) Phylogenetic Tree(s): OG_05_0000235_tree ,
OG_06_0000343 (SeedPlants) Phylogenetic Tree(s): OG_06_0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56580
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s05043p00002670 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
GSVIVT01021449001 No alias No description available 0.03 Archaeplastida
GSVIVT01031263001 No alias No description available 0.03 Archaeplastida
LOC_Os07g02880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g02940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g37400.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g38210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g38220.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g37650.1 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_10435514g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_128814g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_181292g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_440140g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5629g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8097895g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo130246 No alias No description available 0.04 Archaeplastida
Zm00001e018189_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032489_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0010090 trichome morphogenesis IMP Interproscan
BP GO:0042546 cell wall biogenesis RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006935 chemotaxis IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009888 tissue development IEP Neighborhood
CC GO:0009897 external side of plasma membrane IEP Neighborhood
BP GO:0009960 endosperm development IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010183 pollen tube guidance IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010375 stomatal complex patterning IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
MF GO:0015245 fatty acid transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015908 fatty acid transport IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
BP GO:0042330 taxis IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0050918 positive chemotaxis IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
BP GO:0080051 cutin transport IEP Neighborhood
BP GO:0080092 regulation of pollen tube growth IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000122 negative regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR007493 DUF538 26 138
No external refs found!