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  5. AMTR_s00092p00023360

AMTR_s00092p00023360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.10

No description available


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0005601 (LandPlants) Phylogenetic Tree(s): OG_05_0005601_tree ,
OG_06_0000556 (SeedPlants) Phylogenetic Tree(s): OG_06_0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00023360
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT4G30640 No alias RNI-like superfamily protein 0.07 Archaeplastida
LOC_Os02g21260.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g52130.5 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os11g41860.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g088240.4.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
Solyc07g005750.3.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!