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  5. AMTR_s00092p00049320

AMTR_s00092p00049320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.20

Description : Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT-type)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0000855 (LandPlants) Phylogenetic Tree(s): OG_05_0000855_tree ,
OG_06_0000604 (SeedPlants) Phylogenetic Tree(s): OG_06_0000604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00049320
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01003684001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01021611001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
Pp3c5_24930V3.1 No alias cationic amino acid transporter 6 0.02 Archaeplastida
Solyc08g077820.4.1 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Solyc12g011370.3.1 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e005030_P001 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Zm00001e018123_P001 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!