AMTR_s00092p00051600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.22

Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0002621 (LandPlants) Phylogenetic Tree(s): OG_05_0002621_tree ,
OG_06_0004566 (SeedPlants) Phylogenetic Tree(s): OG_06_0004566_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00051600
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Gb_11287 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os07g05570.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 315 637
No external refs found!