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Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.30
Description : Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0026346 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024711 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00092p00064890 | |
| Cluster | HCCA: Cluster_52 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
| AT1G68930 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Archaeplastida | |
| AT2G46050 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Archaeplastida | |
| AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01003804001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | Archaeplastida | |
| GSVIVT01007645001 | No alias | Pentatricopeptide repeat-containing protein ELI1,... | 0.03 | Archaeplastida | |
| GSVIVT01011735001 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.04 | Archaeplastida | |
| GSVIVT01012206001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
| GSVIVT01015318001 | No alias | Pentatricopeptide repeat-containing protein At1g77170,... | 0.05 | Archaeplastida | |
| GSVIVT01015521001 | No alias | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | Archaeplastida | |
| GSVIVT01018018001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.03 | Archaeplastida | |
| GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| GSVIVT01036975001 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | Archaeplastida | |
| LOC_Os01g08120.1 | No alias | RNA editing factor (OTP81) | 0.06 | Archaeplastida | |
| LOC_Os01g46230.1 | No alias | RNA editing factor (MEF1) | 0.03 | Archaeplastida | |
| LOC_Os01g60430.1 | No alias | RNA editing factor (MEF10) | 0.04 | Archaeplastida | |
| LOC_Os02g07050.1 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.08 | Archaeplastida | |
| LOC_Os02g44480.1 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.05 | Archaeplastida | |
| LOC_Os02g53050.1 | No alias | RNA editing factor (CLB19) | 0.03 | Archaeplastida | |
| LOC_Os03g04390.1 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | Archaeplastida | |
| LOC_Os03g13230.1 | No alias | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | Archaeplastida | |
| LOC_Os03g56400.1 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | Archaeplastida | |
| LOC_Os03g63510.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
| LOC_Os04g35650.1 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | Archaeplastida | |
| LOC_Os04g39410.1 | No alias | RNA editing factor (OTP86) | 0.02 | Archaeplastida | |
| LOC_Os04g41120.1 | No alias | Pentatricopeptide repeat-containing protein At4g38010... | 0.04 | Archaeplastida | |
| LOC_Os05g05490.1 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.05 | Archaeplastida | |
| LOC_Os05g49920.1 | No alias | RNA editing factor (ECB2/VAC1) | 0.02 | Archaeplastida | |
| LOC_Os06g27790.1 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | Archaeplastida | |
| LOC_Os06g40860.1 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | Archaeplastida | |
| LOC_Os07g05560.1 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | Archaeplastida | |
| LOC_Os07g09370.1 | No alias | RNA editing factor (CRR28) | 0.03 | Archaeplastida | |
| LOC_Os07g39910.1 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | Archaeplastida | |
| LOC_Os07g47370.1 | No alias | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | Archaeplastida | |
| LOC_Os08g38610.1 | No alias | Pentatricopeptide repeat-containing protein At1g26900,... | 0.06 | Archaeplastida | |
| LOC_Os08g40020.1 | No alias | RNA editing factor (MEF19) | 0.06 | Archaeplastida | |
| LOC_Os09g24520.2 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.08 | Archaeplastida | |
| LOC_Os10g34720.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
| LOC_Os11g29360.1 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | Archaeplastida | |
| LOC_Os11g37330.2 | No alias | RNA editing factor (MEF11) | 0.03 | Archaeplastida | |
| LOC_Os11g45410.1 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | Archaeplastida | |
| LOC_Os12g01850.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| MA_103698g0030 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | Archaeplastida | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | Archaeplastida | |
| Smo120613 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | Archaeplastida | |
| Smo130453 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
| Solyc03g111210.4.1 | No alias | RNA editing factor (OTP80) | 0.03 | Archaeplastida | |
| Solyc11g008940.1.1 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Archaeplastida | |
| Solyc11g065250.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g39680... | 0.04 | Archaeplastida | |
| Zm00001e004121_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e007597_P001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
| Zm00001e031351_P001 | No alias | RNA editing factor (ECD1) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0042802 | identical protein binding | IEP | Neighborhood |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| No external refs found! |