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  5. AMTR_s00092p00134420

AMTR_s00092p00134420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.100

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase


Gene families : OG0001404 (Archaeplastida) Phylogenetic Tree(s): OG0001404_tree ,
OG_05_0001143 (LandPlants) Phylogenetic Tree(s): OG_05_0001143_tree ,
OG_06_0001020 (SeedPlants) Phylogenetic Tree(s): OG_06_0001020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00134420
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT5G11720 No alias Glycosyl hydrolases family 31 protein 0.03 Archaeplastida
GSVIVT01037959001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
MA_10431114g0020 No alias Alpha-glucosidase OS=Spinacia oleracea... 0.03 Archaeplastida
Pp3c10_1820V3.1 No alias alpha-xylosidase 1 0.03 Archaeplastida
Pp3c3_28310V3.1 No alias alpha-xylosidase 1 0.02 Archaeplastida
Smo79855 No alias Cell wall.hemicellulose.xyloglucan.modification and... 0.02 Archaeplastida
Solyc04g007150.3.1 No alias 1,6-alpha-xylosidase 0.02 Archaeplastida
Solyc04g007160.1.1 No alias Alpha-xylosidase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g009630.3.1 No alias Alpha-glucosidase OS=Spinacia oleracea... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
OG_06_0032191
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004733 pyridoxamine-phosphate oxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0046039 GTP metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 209 702
IPR025887 Glyco_hydro_31_N_dom 119 186
No external refs found!