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  5. AT1G57565

AT1G57565


Description : SWI-SNF-related chromatin binding protein


Gene families : OG0010148 (Archaeplastida) Phylogenetic Tree(s): OG0010148_tree ,
OG_05_0010201 (LandPlants) Phylogenetic Tree(s): OG_05_0010201_tree ,
OG_06_0009136 (SeedPlants) Phylogenetic Tree(s): OG_06_0009136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G57565
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G20690 No alias SWI-SNF-related chromatin binding protein 0.13 Archaeplastida
AT1G20795 No alias F-box family protein 0.05 Archaeplastida
AT1G20800 No alias F-box family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!