AT1G57700

Description : Protein kinase superfamily protein

Gene families : OG0000457 (Archaeplastida) Phylogenetic Tree(s): OG0000457_tree ,
OG_05_0000339 (LandPlants) Phylogenetic Tree(s): OG_05_0000339_tree ,
OG_06_0000237 (SeedPlants) Phylogenetic Tree(s): OG_06_0000237_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G57700
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc01g067640.3.1	No alias	protein kinase (CDK9)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
CC	GO:0000418	RNA polymerase IV complex	IEP	Neighborhood
BP	GO:0000712	resolution of meiotic recombination intermediates	IEP	Neighborhood
BP	GO:0000723	telomere maintenance	IEP	Neighborhood
BP	GO:0000726	non-recombinational repair	IEP	Neighborhood
CC	GO:0000795	synaptonemal complex	IEP	Neighborhood
MF	GO:0003720	telomerase activity	IEP	Neighborhood
MF	GO:0003721	telomerase RNA reverse transcriptase activity	IEP	Neighborhood
MF	GO:0003964	RNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0004004	ATP-dependent RNA helicase activity	IEP	Neighborhood
MF	GO:0004049	anthranilate synthase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
CC	GO:0005950	anthranilate synthase complex	IEP	Neighborhood
BP	GO:0006089	lactate metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006278	RNA-dependent DNA biosynthetic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006302	double-strand break repair	IEP	Neighborhood
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Neighborhood
BP	GO:0006310	DNA recombination	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006342	chromatin silencing	IEP	Neighborhood
BP	GO:0006346	methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0006475	internal protein amino acid acetylation	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006566	threonine metabolic process	IEP	Neighborhood
BP	GO:0006567	threonine catabolic process	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007004	telomere maintenance via telomerase	IEP	Neighborhood
BP	GO:0007129	synapsis	IEP	Neighborhood
BP	GO:0007131	reciprocal meiotic recombination	IEP	Neighborhood
MF	GO:0008186	RNA-dependent ATPase activity	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008373	sialyltransferase activity	IEP	Neighborhood
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	Neighborhood
BP	GO:0009438	methylglyoxal metabolic process	IEP	Neighborhood
BP	GO:0009662	etioplast organization	IEP	Neighborhood
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010495	long-distance posttranscriptional gene silencing	IEP	Neighborhood
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010833	telomere maintenance via telomere lengthening	IEP	Neighborhood
BP	GO:0015074	DNA integration	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
BP	GO:0016573	histone acetylation	IEP	Neighborhood
MF	GO:0016833	oxo-acid-lyase activity	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Neighborhood
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Neighborhood
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	Neighborhood
BP	GO:0031048	chromatin silencing by small RNA	IEP	Neighborhood
BP	GO:0031056	regulation of histone modification	IEP	Neighborhood
BP	GO:0031060	regulation of histone methylation	IEP	Neighborhood
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Neighborhood
CC	GO:0031350	intrinsic component of plastid membrane	IEP	Neighborhood
CC	GO:0031351	integral component of plastid membrane	IEP	Neighborhood
CC	GO:0031354	intrinsic component of plastid outer membrane	IEP	Neighborhood
CC	GO:0031355	integral component of plastid outer membrane	IEP	Neighborhood
CC	GO:0031358	intrinsic component of chloroplast outer membrane	IEP	Neighborhood
CC	GO:0031359	integral component of chloroplast outer membrane	IEP	Neighborhood
BP	GO:0031935	regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0032200	telomere organization	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0033044	regulation of chromosome organization	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
BP	GO:0035825	homologous recombination	IEP	Neighborhood
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	Neighborhood
BP	GO:0042182	ketone catabolic process	IEP	Neighborhood
BP	GO:0043966	histone H3 acetylation	IEP	Neighborhood
BP	GO:0043967	histone H4 acetylation	IEP	Neighborhood
BP	GO:0045132	meiotic chromosome segregation	IEP	Neighborhood
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	Neighborhood
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0046185	aldehyde catabolic process	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0050000	chromosome localization	IEP	Neighborhood
BP	GO:0051026	chiasma assembly	IEP	Neighborhood
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0051567	histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051570	regulation of histone H3-K9 methylation	IEP	Neighborhood
BP	GO:0051596	methylglyoxal catabolic process	IEP	Neighborhood
BP	GO:0060249	anatomical structure homeostasis	IEP	Neighborhood
BP	GO:0060968	regulation of gene silencing	IEP	Neighborhood
BP	GO:0061647	histone H3-K9 modification	IEP	Neighborhood
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	Neighborhood
BP	GO:0061982	meiosis I cell cycle process	IEP	Neighborhood
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	Neighborhood
BP	GO:0071897	DNA biosynthetic process	IEP	Neighborhood
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Neighborhood
BP	GO:0098813	nuclear chromosome segregation	IEP	Neighborhood
CC	GO:0099086	synaptonemal structure	IEP	Neighborhood
BP	GO:1900109	regulation of histone H3-K9 dimethylation	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood
BP	GO:1902275	regulation of chromatin organization	IEP	Neighborhood
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903046	meiotic cell cycle process	IEP	Neighborhood
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	146	430

External Links

No external refs found!

AT1G57700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation