AMTR_s00095p00106000 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.63

Description : Acidic endochitinase OS=Nicotiana tabacum

Gene families : OG0001290 (Archaeplastida) Phylogenetic Tree(s): OG0001290_tree ,
OG_05_0001427 (LandPlants) Phylogenetic Tree(s): OG_05_0001427_tree ,
OG_06_0001002 (SeedPlants) Phylogenetic Tree(s): OG_06_0001002_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00095p00106000
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00104690	evm_27.TU.AmTr_v1...	Acidic endochitinase OS=Nicotiana tabacum	0.03	Archaeplastida
AMTR_s00095p00172710	evm_27.TU.AmTr_v1...	Acidic endochitinase OS=Nicotiana tabacum	0.04	Archaeplastida
AMTR_s00111p00033060	evm_27.TU.AmTr_v1...	Hevamine-A OS=Hevea brasiliensis	0.03	Archaeplastida
GSVIVT01027026001	No alias	Acidic endochitinase OS=Nicotiana tabacum	0.04	Archaeplastida
Gb_38192	No alias	Acidic endochitinase OS=Vitis vinifera...	0.04	Archaeplastida
LOC_Os07g19040.1	No alias	Acidic endochitinase OS=Nicotiana tabacum...	0.02	Archaeplastida
Mp2g08740.1	No alias	Acidic endochitinase SE2 OS=Beta vulgaris...	0.03	Archaeplastida
Mpzg00570.1	No alias	Hevamine-A OS=Hevea brasiliensis (sp\|p23472\|chly_hevbr : 244.0)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0042802	identical protein binding	IEP	Neighborhood
BP	GO:0043086	negative regulation of catalytic activity	IEP	Neighborhood
BP	GO:0044092	negative regulation of molecular function	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001223	Glyco_hydro18_cat	32	109

External Links

No external refs found!