AMTR_s00095p00139840 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.102

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase

Gene families : OG0007355 (Archaeplastida) Phylogenetic Tree(s): OG0007355_tree ,
OG_05_0008296 (LandPlants) Phylogenetic Tree(s): OG_05_0008296_tree ,
OG_06_0009645 (SeedPlants) Phylogenetic Tree(s): OG_06_0009645_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00095p00139840
Cluster	HCCA: Cluster_247

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g022350	No alias	DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01027957001	No alias	DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa...	0.02	Archaeplastida
LOC_Os04g43140.1	No alias	DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa...	0.02	Archaeplastida
Mp5g03860.1	No alias	DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa...	0.02	Archaeplastida
Pp3c17_22010V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
MF	GO:0008026	ATP-dependent helicase activity	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070035	purine NTP-dependent helicase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	553	627
IPR000490	Glyco_hydro_17	824	884
IPR011545	DEAD/DEAH_box_helicase_dom	232	454

External Links

No external refs found!

AMTR_s00095p00139840 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation