1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00095p00148510

AMTR_s00095p00148510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.116

Description : Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease


Gene families : OG0000010 (Archaeplastida) Phylogenetic Tree(s): OG0000010_tree ,
OG_05_0004456 (LandPlants) Phylogenetic Tree(s): OG_05_0004456_tree ,
OG_06_0002870 (SeedPlants) Phylogenetic Tree(s): OG_06_0002870_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00148510
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00149630 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
LOC_Os03g08790.1 No alias pepsin-type protease 0.03 Archaeplastida
Pp3c1_6450V3.1 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
Solyc08g005820.1.1 No alias pepsin-type protease 0.02 Archaeplastida
Solyc10g009410.1.1 No alias pepsin-type protease 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001461 Aspartic_peptidase_A1 244 432
No external refs found!