AMTR_s00095p00149630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.119

Description : Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease


Gene families : OG0000010 (Archaeplastida) Phylogenetic Tree(s): OG0000010_tree ,
OG_05_0004456 (LandPlants) Phylogenetic Tree(s): OG_05_0004456_tree ,
OG_06_0002870 (SeedPlants) Phylogenetic Tree(s): OG_06_0002870_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00149630
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00061190 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
AMTR_s00057p00166040 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00095p00148510 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
AMTR_s00095p00155590 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00095p00156630 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00095p00156870 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
AMTR_s00095p00166180 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
Gb_02537 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os06g20040.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os06g40818.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os07g34920.1 No alias pepsin-type protease 0.02 Archaeplastida
Zm00001e036206_P001 No alias pepsin-type protease 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001461 Aspartic_peptidase_A1 339 530
IPR001461 Aspartic_peptidase_A1 92 186
No external refs found!