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  5. AMTR_s00095p00166740

AMTR_s00095p00166740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.146

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor


Gene families : OG0007389 (Archaeplastida) Phylogenetic Tree(s): OG0007389_tree ,
OG_05_0009288 (LandPlants) Phylogenetic Tree(s): OG_05_0009288_tree ,
OG_06_0011516 (SeedPlants) Phylogenetic Tree(s): OG_06_0011516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00166740
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT3G17930 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 Archaeplastida
GSVIVT01008459001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 Archaeplastida
LOC_Os01g59080.1 No alias DAC protein involved in cytochrome b6/f complex assembly 0.04 Archaeplastida
MA_10020874g0010 No alias No annotation 0.07 Archaeplastida
Pp3c5_23310V3.1 No alias No annotation 0.05 Archaeplastida
Smo406591 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 Archaeplastida
Solyc05g006440.4.1 No alias DAC protein involved in cytochrome b6/f complex assembly 0.07 Archaeplastida
Zm00001e019533_P001 No alias DAC protein involved in cytochrome b6/f complex assembly 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021562 DUF3007 91 188
No external refs found!