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Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.150
Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor
Gene families : OG0002515 (Archaeplastida) Phylogenetic Tree(s): OG0002515_tree ,
OG_05_0001893 (LandPlants) Phylogenetic Tree(s): OG_05_0001893_tree ,
OG_06_0001162 (SeedPlants) Phylogenetic Tree(s): OG_06_0001162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00095p00172370 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G28700 | AGL46 | AGAMOUS-like 46 | 0.04 | Archaeplastida | |
| GSVIVT01031333001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004372 | glycine hydroxymethyltransferase activity | IEP | Neighborhood |
| MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Neighborhood |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006563 | L-serine metabolic process | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0016032 | viral process | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Neighborhood |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Neighborhood |
| BP | GO:0044403 | symbiont process | IEP | Neighborhood |
| BP | GO:0044419 | interspecies interaction between organisms | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| MF | GO:0050661 | NADP binding | IEP | Neighborhood |
| BP | GO:0051704 | multi-organism process | IEP | Neighborhood |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 11 | 51 |
| No external refs found! |