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  5. AMTR_s00096p00013440

AMTR_s00096p00013440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00096.2

No description available


Gene families : OG0003216 (Archaeplastida) Phylogenetic Tree(s): OG0003216_tree ,
OG_05_0002186 (LandPlants) Phylogenetic Tree(s): OG_05_0002186_tree ,
OG_06_0001228 (SeedPlants) Phylogenetic Tree(s): OG_06_0001228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00013440
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00057250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00016p00103420 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00039p00132060 evm_27.TU.AmTr_v1... No description available 0.08 Archaeplastida
AMTR_s00039p00132080 evm_27.TU.AmTr_v1... No description available 0.09 Archaeplastida
AMTR_s00067p00132270 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00067p00132300 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00116p00137450 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00121p00085790 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00136p00088390 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!