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  5. AMTR_s00096p00056370

AMTR_s00096p00056370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00096.26

No description available


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00096p00056370
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.02 Archaeplastida
GSVIVT01017142001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_08717 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431079g0020 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10432222g0010 No alias No annotation 0.04 Archaeplastida
MA_175083g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_562728g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7954986g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9977400g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g007790.1.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!