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  5. AMTR_s00097p00139510

AMTR_s00097p00139510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00097.38

Description : External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.SPA regulator component


Gene families : OG0000790 (Archaeplastida) Phylogenetic Tree(s): OG0000790_tree ,
OG_05_0001763 (LandPlants) Phylogenetic Tree(s): OG_05_0001763_tree ,
OG_06_0004834 (SeedPlants) Phylogenetic Tree(s): OG_06_0004834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00097p00139510
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AT4G11110 SPA2 SPA1-related 2 0.02 Archaeplastida
Cre02.g085050 No alias E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_423393g0010 No alias protein kinase (PEK). regulator component SPA of... 0.04 Archaeplastida
Smo141846 No alias External stimuli response.light.red/far red... 0.02 Archaeplastida
Smo98534 No alias External stimuli response.light.red/far red... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 506 553
IPR001680 WD40_repeat 913 947
IPR001680 WD40_repeat 998 1031
No external refs found!