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  5. AMTR_s00098p00115780

AMTR_s00098p00115780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00098.31

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL24 component


Gene families : OG0002020 (Archaeplastida) Phylogenetic Tree(s): OG0002020_tree ,
OG_05_0007124 (LandPlants) Phylogenetic Tree(s): OG_05_0007124_tree ,
OG_06_0009316 (SeedPlants) Phylogenetic Tree(s): OG_06_0009316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00098p00115780
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT5G54600 No alias Translation protein SH3-like family protein 0.02 Archaeplastida
Cre16.g652550 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Mp3g07850.1 No alias component psRPL24 of large ribosomal subunit proteome 0.02 Archaeplastida
Pp3c9_9200V3.1 No alias Translation protein SH3-like family protein 0.02 Archaeplastida
Solyc07g063960.3.1 No alias component psRPL24 of large ribosomal subunit proteome 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR005824 KOW 44 75
No external refs found!